ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4dyjB4 - ECOD Domain | ECOD

ECOD/Domains/e4dyjB4

e4dyjB4

UID: 001160171

PDB

Range: B:26-48,B:281-409
PDB: 4DYJ chain B(all domains)
UniProt: I6LNY0 (all domains)
Gene: bar

Molecule: broad specificity amino acid racemase

3D Structure

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Related Domains

Browse other domains in Ala_racemase_C →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupAlanine racemase-C(1.1.7)

FFamilyAla_racemase_C(1.1.7.6)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Glycerin, Sulfate ion)

GlycerinGOL
DrugBank DB09462
Sulfate ionSO4

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00842Ala_racemase_C

Alanine racemase, C-terminal domain

ClanCL0866ALR_C-like

External Links

ECOD PDB View: 4DYJ RCSB PDB: 4DYJ PDBe: 4DYJ UniProt: I6LNY0

Downloads

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