ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3vt2A4 - ECOD Domain | ECOD

ECOD/Domains/e3vt2A4

e3vt2A4

UID: 001161045

PDB

Range: A:354-493
PDB: 3VT2 chain A(all domains)
UniProt: A3DD67 (all domains)
Gene: Cthe_0661

Molecule: Ricin B lectin

3D Structure

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Related Domains

Browse other domains in RicinB_lectin_2 →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-Trefoil(6)

HH-groupbeta-Trefoil(6.1)

TT-groupbeta-Trefoil(6.1.1)

FFamilyRicinB_lectin_2(6.1.1.19)

Ligands

in contact, ≤ 4 Å

Isopropyl beta-D-thiogalactopyranosideIPT
drugDrugBank DB01862

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Pfam Families

PF14200RicinB_lectin_2

Ricin-type beta-trefoil lectin domain-like

ClanCL0066Trefoil

External Links

ECOD PDB View: 3VT2 RCSB PDB: 3VT2 PDBe: 3VT2 UniProt: A3DD67

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.