ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3s3jA18 - ECOD Domain | ECOD

ECOD/Domains/e3s3jA18

e3s3jA18

UID: 001162109

PDB

Range: A:2-145
PDB: 3S3J chain A(all domains)
UniProt: P21980 (all domains)
Gene: TGM2

Molecule: Protein-glutamine gamma-glutamyltransferase 2

3D Structure

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Related Domains

Browse other domains in Transglut_N →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyTransglut_N(11.1.1.16)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00868Transglut_N

Transglutaminase family

ClanCL0159E-set

External Links

ECOD PDB View: 3S3J RCSB PDB: 3S3J PDBe: 3S3J UniProt: P21980

Downloads

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