ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3raeB5 - ECOD Domain | ECOD

ECOD/Domains/e3raeB5

e3raeB5

UID: 001165325

PDB

Range: B:3-156
PDB: 3RAE chain B(all domains)
UniProt: P72525 (all domains)
Gene: parC

Molecule: DNA topoisomerase 4 subunit A

3D Structure

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Related Domains

Browse other domains in DNA_topoisoIV →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupwinged helix domain(101.1.2)

FFamilyDNA_topoisoIV(101.1.2.9)

Ligands

in contact, ≤ 4 Å

LevofloxacinLFX
drugDrugBank DB01137
Magnesium ionMG
metalwithin 5 Å only

Shown in the structure viewer.

Pfam Families

PF00521DNA_topoisoIV

DNA gyrase/topoisomerase IV, subunit A

External Links

ECOD PDB View: 3RAE RCSB PDB: 3RAE PDBe: 3RAE UniProt: P72525

Downloads

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Drug annotations from DrugDomain.