ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4gd3B2 - ECOD Domain | ECOD

ECOD/Domains/e4gd3B2

e4gd3B2

UID: 001168145

PDB

Range: B:8-210
PDB: 4GD3 chain B(all domains)
UniProt: P0AAM1 (all domains)
Gene: hyaC

Molecule: Ni/Fe-hydrogenase 1 B-type cytochrome subunit

3D Structure

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Related Domains

Browse other domains in Ni_hydr_CYTB →

Classification

AArchitecturealpha bundles(a.7)

XX-groupTransmembrane heme-binding four-helical bundle(5069)

HH-groupTransmembrane heme-binding four-helical bundle(5069.1)

TT-groupTransmembrane di-heme cytochromes(5069.1.1)

FFamilyNi_hydr_CYTB(5069.1.1.2)

Ligands

in contact, ≤ 4 Å

FerrohemeHEM
drugDrugBank DB18267

+ 1 additive (Dodecyl-beta-d-maltoside)

Dodecyl-beta-d-maltosideLMT

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01292Ni_hydr_CYTB

Prokaryotic cytochrome b561

ClanCL03282heme_cytochrom

External Links

ECOD PDB View: 4GD3 RCSB PDB: 4GD3 PDBe: 4GD3 UniProt: P0AAM1

Downloads

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