ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e3ppcA4 - ECOD Domain | ECOD

ECOD/Domains/e3ppcA4

e3ppcA4

UID: 001169927

PDB

Range: A:406-767
PDB: 3PPC chain A(all domains)
UniProt: P82610 (all domains)
Gene: MET6

Molecule: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase

3D Structure

Loading viewer...

Related Domains

Browse other domains in Meth_synt_2 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyMeth_synt_2(2002.1.1.74)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01717Meth_synt_2

Cobalamin-independent synthase, Catalytic domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 3PPC RCSB PDB: 3PPC PDBe: 3PPC UniProt: P82610

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure