ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3ey9B4 - ECOD Domain | ECOD

ECOD/Domains/e3ey9B4

e3ey9B4

UID: 001170913

PDB

Range: B:2-189
PDB: 3EY9 chain B(all domains)
UniProt: P07003 (all domains)
Gene: poxB

Molecule: Pyruvate dehydrogenase [cytochrome]

3D Structure

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Related Domains

Browse other domains in TPP_enzyme_N →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupThiamin diphosphate-binding fold (THDP-binding)(7574)

HH-groupThiamin diphosphate-binding fold (THDP-binding)(7574.1)

TT-groupThiamin diphosphate-binding fold (THDP-binding)(7574.1.1)

FFamilyTPP_enzyme_N(7574.1.1.7)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147
Thiamine diphosphateTPP
within 5 Å only

+ 1 additive (Sulfate ion)

Pfam Families

PF02776TPP_enzyme_N

Thiamine pyrophosphate enzyme, N-terminal TPP binding domain

ClanCL0254THDP-binding

External Links

ECOD PDB View: 3EY9 RCSB PDB: 3EY9 PDBe: 3EY9 UniProt: P07003

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Sulfate ionSO4

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.