ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1w0nA1 - ECOD Domain | ECOD

ECOD/Domains/e1w0nA1

e1w0nA1

UID: 000001171

RepresentativePDB

Range: A:12-131
PDB: 1W0N chain A(all domains)
UniProt: P45796 (all domains)
Gene: xynD

Molecule: ENDO-1,4-BETA-XYLANASE D

3D Structure

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Related Domains

Browse other domains in CBM_6 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupGalactose-binding domain-like(10.32)

TT-groupGalactose-binding domain-like(10.32.1)

FFamilyCBM_6(10.32.1.12)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
Magnesium ionMG
metal

+ 1 additive (Sulfate ion)

Sulfate ion

Pfam Families

Carbohydrate binding module (family 6)

ClanCL0202GBD

External Links

ECOD PDB View: 1W0N RCSB PDB: 1W0N PDBe: 1W0N UniProt: P45796

Downloads

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DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.