ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1fq5A3 - ECOD Domain | ECOD

ECOD/Domains/e1fq5A3

e1fq5A3

UID: 001171385

PDB

Range: A:0-147
PDB: 1FQ5 chain A(all domains)
UniProt: P07267 (all domains)
Gene: PEP4

Molecule: SACCHAROPEPSIN

3D Structure

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Related Domains

Browse other domains in Asp →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupacid protease(1.1.1)

FFamilyAsp(1.1.1.1)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141within 5 Å only
N-[(5S,9S,10S,13S)-9-hydroxy-5,10-bis(2-methylpropyl)-4,7,12,16-tetraoxo-3,6,11,17-tetraazabicyclo[17.3.1]tricosa-1(23),19,21-trien-13-yl]-3-(naphthalen-1-yl)-2-(naphthalen-1-ylmethyl)propanamide0GM

Pfam Families

Eukaryotic aspartyl protease

ClanCL0129Peptidase_AA

External Links

ECOD PDB View: 1FQ5 RCSB PDB: 1FQ5 PDBe: 1FQ5 UniProt: P07267

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.