ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1w6hB3 - ECOD Domain | ECOD

ECOD/Domains/e1w6hB3

e1w6hB3

UID: 001171448

PDB

Range: B:178-329
PDB: 1W6H chain B(all domains)
UniProt: P46925 (all domains)
Gene: PMII

Molecule: PLASMEPSIN 2

3D Structure

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Related Domains

Browse other domains in Asp →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupacid protease(1.1.1)

FFamilyAsp(1.1.1.1)

Ligands

in contact, ≤ 4 Å

N-((3S,4S)-5-[(4-BROMOBENZYL)OXY]-3-HYDROXY-4-{[N-(PYRIDIN-2-YLCARBONYL)-L-VALYL]AMINO}PENTANOYL)-L-ALANYL-L-LEUCINAMIDETIT

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Eukaryotic aspartyl protease

ClanCL0129Peptidase_AA

External Links

ECOD PDB View: 1W6H RCSB PDB: 1W6H PDBe: 1W6H UniProt: P46925

Downloads

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