ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1fmxB2 - ECOD Domain | ECOD

ECOD/Domains/e1fmxB2

e1fmxB2

UID: 001171494

PDB

Range: B:149-329
PDB: 1FMX chain B(all domains)
UniProt: P07267 (all domains)
Gene: PEP4

Molecule: SACCHAROPEPSIN

3D Structure

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Related Domains

Browse other domains in Asp →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupacid protease(1.1.1)

FFamilyAsp(1.1.1.1)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Eukaryotic aspartyl protease

ClanCL0129Peptidase_AA

External Links

ECOD PDB View: 1FMX RCSB PDB: 1FMX PDBe: 1FMX UniProt: P07267

Downloads

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