ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1tg6D1 - ECOD Domain | ECOD

ECOD/Domains/e1tg6D1

e1tg6D1

UID: 000117239

PDB

Range: D:2-193
PDB: 1TG6 chain D(all domains)
UniProt: Q16740 (all domains)
Gene: CLPP

Molecule: Putative ATP-dependent Clp protease proteolytic subunit

3D Structure

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Related Domains

Browse other domains in CLP_protease →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupClpP/crotonase(2486)

HH-groupClpP/crotonase(2486.1)

TT-groupClpP/crotonase(2486.1.1)

FFamilyCLP_protease(2486.1.1.2)

Ligands

in contact, ≤ 4 Å

N-formylmethionineFME

+ 3 additives (1,4-Dioxane, Glycerin, 1,2-ETHANEDIOL)

1,4-DioxaneDIO
DrugBank DB03316
GlycerinGOL

Pfam Families

PF00574CLP_protease

Clp protease

ClanCL0127ClpP_crotonase

External Links

ECOD PDB View: 1TG6 RCSB PDB: 1TG6 PDBe: 1TG6 UniProt: Q16740

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.