ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2rd5D2 - ECOD Domain | ECOD

ECOD/Domains/e2rd5D2

e2rd5D2

UID: 001175423

PDB

Range: D:5-130
PDB: 2RD5 chain D(all domains)
UniProt: Q9ZST4 (all domains)
Gene: GLB1

Molecule: PII protein

3D Structure

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Related Domains

Browse other domains in P-II →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupGlnB-like(304.5)

TT-groupGlnB-like(304.5.1)

FFamilyP-II(304.5.1.1)

Ligands

in contact, ≤ 4 Å

ATPATP
drugDrugBank DB00171
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Nitrogen regulatory protein P-II

ClanCL0089GlnB-like

External Links

ECOD PDB View: 2RD5 RCSB PDB: 2RD5 PDBe: 2RD5 UniProt: Q9ZST4

Downloads

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