ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1vrgE2 - ECOD Domain | ECOD

ECOD/Domains/e1vrgE2

e1vrgE2

UID: 000117549

PDB

Range: E:252-515
PDB: 1VRG chain E(all domains)
UniProt: Q9WZH5 (all domains)
Gene: TM_0716

Molecule: propionyl-CoA carboxylase, beta subunit

3D Structure

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Related Domains

Browse other domains in Carboxyl_trans →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupClpP/crotonase(2486)

HH-groupClpP/crotonase(2486.1)

TT-groupClpP/crotonase(2486.1.1)

FFamilyCarboxyl_trans(2486.1.1.3)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

+ 1 additive (Bicarbonate ion)

Bicarbonate ionBCT

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01039Carboxyl_trans

Carboxyl transferase domain

ClanCL0127ClpP_crotonase

External Links

ECOD PDB View: 1VRG RCSB PDB: 1VRG PDBe: 1VRG UniProt: Q9WZH5

Downloads

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