ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2wkpA4 - ECOD Domain | ECOD

ECOD/Domains/e2wkpA4

e2wkpA4

UID: 001177485

PDB

Range: A:404-541
PDB: 2WKP chain A(all domains)
UniProt: O49003 (all domains)
Gene: NPH1-1

Molecule: NPH1-1, RAS-RELATED C3 BOTULINUM TOXIN SUBSTRATE 1

3D Structure

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Related Domains

Browse other domains in PAS_9 →

Classification

AArchitecturea+b three layers(a.12)

XX-groupProfilin-like(223)

HH-groupsensor domains(223.1)

TT-groupsensor domains(223.1.1)

FFamilyPAS_9(223.1.1.25)

Ligands

in contact, ≤ 4 Å

Flavin mononucleotideFMN
drugDrugBank DB03247
Calcium ionCA
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PAS domain

ClanCL0183PAS_Fold

External Links

ECOD PDB View: 2WKP RCSB PDB: 2WKP PDBe: 2WKP UniProt: O49003

Downloads

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