ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1j3lA1 - ECOD Domain | ECOD

ECOD/Domains/e1j3lA1

e1j3lA1

UID: 000117775

PDB

Range: A:1-153
PDB: 1J3L chain A(all domains)
UniProt: Q5SIP7 (all domains)
Gene: TTHA1322

Molecule: Demethylmenaquinone Methyltransferase

3D Structure

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Related Domains

Browse other domains in RraA-like →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupThe "swivelling" beta/beta/alpha domains(2487)

HH-groupThe "swivelling" beta/beta/alpha domain(2487.1)

TT-groupThe "swivelling" beta/beta/alpha domain(2487.1.1)

FFamilyRraA-like(2487.1.1.8)

Ligands

in contact, ≤ 4 Å

Chloride ionCL

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF03737RraA-like

Aldolase/RraA

ClanCL0364Leu-IlvD

External Links

ECOD PDB View: 1J3L RCSB PDB: 1J3L PDBe: 1J3L UniProt: Q5SIP7

Downloads

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