ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4mbsA3 - ECOD Domain | ECOD

ECOD/Domains/e4mbsA3

e4mbsA3

UID: 001178148

PDB

Range: A:222-1054
PDB: 4MBS chain A(all domains)
UniProt: P51681 (all domains)
Gene: CCR5

Molecule: Chimera protein of C-C chemokine receptor type 5 and Rubredoxin

3D Structure

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Related Domains

Browse other domains in Rubredoxin →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRubredoxin-like(375)

HH-groupRubredoxin-related(375.1)

TT-groupRubredoxin-related(375.1.1)

FFamilyRubredoxin(375.1.1.2)

Ligands

in contact, ≤ 4 Å

MaravirocMRV
drugDrugBank DB04835within 5 Å only
Zinc ionZN
metal

Pfam Families

PF00301Rubredoxin

Rubredoxin

ClanCL0167Zn_Beta_Ribbon

External Links

ECOD PDB View: 4MBS RCSB PDB: 4MBS PDBe: 4MBS UniProt: P51681

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate

within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.