ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4f5yB2 - ECOD Domain | ECOD

ECOD/Domains/e4f5yB2

e4f5yB2

UID: 001178400

PDB

Range: B:151-343
PDB: 4F5Y chain B(all domains)
UniProt: Q86WV6 (all domains)
Gene: STING1

Molecule: Transmembrane protein 173

3D Structure

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Related Domains

Browse other domains in TMEM173 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupSTING C-terminal domain(3398)

HH-groupSTING C-terminal domain(3398.1)

TT-groupSTING C-terminal domain(3398.1.1)

FFamilyTMEM173(3398.1.1.1)

Ligands

in contact, ≤ 4 Å

9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one)C2E
Calcium ionCA
metal

Shown in the structure viewer. Drug annotations from .

Pfam Families

PF15009STING_LBD

STING ligand-binding domain

ClanCL0709STING

External Links

ECOD PDB View: 4F5Y RCSB PDB: 4F5Y PDBe: 4F5Y UniProt: Q86WV6

Downloads

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