ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4fc8B2 - ECOD Domain | ECOD

ECOD/Domains/e4fc8B2

e4fc8B2

UID: 001178476

PDB

Range: B:1-152
PDB: 4FC8 chain B(all domains)
UniProt: Q6CK86 (all domains)
Gene: KLLA0_F12672g

Molecule: transcription protein Rtr1

3D Structure

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Related Domains

Browse other domains in RPAP2_Rtr1 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRegulator of transcription protein Rtr1(3371)

HH-groupRegulator of transcription protein Rtr1(3371.1)

TT-groupRegulator of transcription protein Rtr1(3371.1.1)

FFamilyRPAP2_Rtr1(3371.1.1.1)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF04181RPAP2_Rtr1

Rtr1/RPAP2 family

External Links

ECOD PDB View: 4FC8 RCSB PDB: 4FC8 PDBe: 4FC8 UniProt: Q6CK86

Downloads

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