ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3jyyA3 - ECOD Domain | ECOD

ECOD/Domains/e3jyyA3

e3jyyA3

UID: 001179389

RepresentativePDB

Range: A:133-267
PDB: 3JYY chain A(all domains)
UniProt: Q9WVY4 (all domains)
Gene: linB

Molecule: Lincosamide nucleotidyltransferase

3D Structure

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Related Domains

Browse other domains in LinB-like_C →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHhH/H2TH(102)

HH-groupSAM/DNA-glycosylase(102.1)

TT-groupPAP/OAS1 substrate-binding domain(102.1.3)

FFamilyLinB-like_C(102.1.3.10)

Ligands

in contact, ≤ 4 Å

Pyrophosphoric acidPPV
drugDrugBank DB04160

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF21418LinB-like_C

Lincosamide nucleotidyltransferase-like, C-terminal domain

ClanCL0260NTP_transf

External Links

ECOD PDB View: 3JYY RCSB PDB: 3JYY PDBe: 3JYY UniProt: Q9WVY4

Downloads

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