ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4e8fB3 - ECOD Domain | ECOD

ECOD/Domains/e4e8fB3

e4e8fB3

UID: 001179391

PDB

Range: B:186-380
PDB: 4E8F chain B(all domains)
UniProt: O13833 (all domains)
Gene: cid1

Molecule: Poly(A) RNA polymerase protein cid1

3D Structure

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Related Domains

Browse other domains in PAP_assoc →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHhH/H2TH(102)

HH-groupSAM/DNA-glycosylase(102.1)

TT-groupPAP/OAS1 substrate-binding domain(102.1.3)

FFamilyPAP_assoc(102.1.3.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF03828PAP_assoc

Cid1 family poly A polymerase

External Links

ECOD PDB View: 4E8F RCSB PDB: 4E8F PDBe: 4E8F UniProt: O13833

Downloads

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