ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2fr6A1 - ECOD Domain | ECOD

ECOD/Domains/e2fr6A1

e2fr6A1

UID: 000117941

PDB

Range: A:11-146
PDB: 2FR6 chain A(all domains)
UniProt: P56389 (all domains)
Gene: Cda

Molecule: Cytidine deaminase

3D Structure

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Related Domains

Browse other domains in dCMP_cyt_deam_1 →

Classification

AArchitecturea+b three layers(a.12)

XX-groupCytidine deaminase-like(2492)

HH-groupCytidine deaminase-like(2492.1)

TT-groupCytidine deaminase-like(2492.1.1)

FFamilydCMP_cyt_deam_1(2492.1.1.1)

Ligands

in contact, ≤ 4 Å

CytidineCTN
drugDrugBank DB02097
UridineURI
drugDrugBank DB02745
Zinc ion

Pfam Families

PF00383dCMP_cyt_deam_1

Cytidine and deoxycytidylate deaminase zinc-binding region

ClanCL0109CDA

External Links

ECOD PDB View: 2FR6 RCSB PDB: 2FR6 PDBe: 2FR6 UniProt: P56389

Downloads

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metal

AmmoniaNH3

within 5 Å only

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.