ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2d5nA2 - ECOD Domain | ECOD

ECOD/Domains/e2d5nA2

e2d5nA2

UID: 000118003

PDB

Range: A:1-145
PDB: 2D5N chain A(all domains)
UniProt: P17618 (all domains)
Gene: ribD

Molecule: Riboflavin biosynthesis protein ribD

3D Structure

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Related Domains

Browse other domains in dCMP_cyt_deam_1 →

Classification

AArchitecturea+b three layers(a.12)

XX-groupCytidine deaminase-like(2492)

HH-groupCytidine deaminase-like(2492.1)

TT-groupCytidine deaminase-like(2492.1.1)

FFamilydCMP_cyt_deam_1(2492.1.1.1)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00383dCMP_cyt_deam_1

Cytidine and deoxycytidylate deaminase zinc-binding region

ClanCL0109CDA

External Links

ECOD PDB View: 2D5N RCSB PDB: 2D5N PDBe: 2D5N UniProt: P17618

Downloads

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