ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4la2B3 - ECOD Domain | ECOD

ECOD/Domains/e4la2B3

e4la2B3

UID: 001180049

PDB

Range: B:1-192
PDB: 4LA2 chain B(all domains)
UniProt: D0CY60 (all domains)
Gene: dddQ

Molecule: Dimethylsulphoniopropionate (DMSP) lyase DddQ

3D Structure

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Related Domains

Browse other domains in DMSP_lyase →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupDouble-stranded beta-helix(10.12)

TT-groupDouble-stranded beta-helix(10.12.1)

FFamilyDMSP_lyase(10.12.1.58)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

+ 1 additive (2-(N-morpholino)ethanesulfonic acid)

2-(N-morpholino)ethanesulfonic acidMES
DrugBank DB03814

Shown in the structure viewer.

Pfam Families

PF16867DMSP_lyase

Dimethlysulfonioproprionate lyase

ClanCL0029Cupin

External Links

ECOD PDB View: 4LA2 RCSB PDB: 4LA2 PDBe: 4LA2 UniProt: D0CY60

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Drug annotations from DrugDomain.