ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2exaA4 - ECOD Domain | ECOD

ECOD/Domains/e2exaA4

e2exaA4

UID: 000118071

PDB

Range: A:80-170,A:249-292
PDB: 2EXA chain A(all domains)
UniProt: P24228 (all domains)
Gene: dacB

Molecule: Penicillin-binding protein 4

3D Structure

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Related Domains

Browse other domains in Peptidase_S13 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupDTD-like(2494)

HH-groupInserted a+b domain in Dac-like proteins(2494.2)

TT-groupInserted a+b domain in Dac-like proteins(2494.2.1)

FFamilyPeptidase_S13(2494.2.1.1)

Ligands

in contact, ≤ 4 Å

(2R,5R)-2-[(2S,3R)-3-hydroxy-1-oxobutan-2-yl]-5-[(2R)-tetrahydrofuran-2-yl]-2,5-dihydro-1,3-thiazole-4-carboxylic acidDGF
within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02113Peptidase_S13

D-Ala-D-Ala carboxypeptidase 3 (S13) family

ClanCL0013Beta-lactamase

External Links

ECOD PDB View: 2EXA RCSB PDB: 2EXA PDBe: 2EXA UniProt: P24228

Downloads

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