ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2xjaA5 - ECOD Domain | ECOD

ECOD/Domains/e2xjaA5

e2xjaA5

UID: 001184168

PDB

Range: A:26-141
PDB: 2XJA chain A(all domains)
UniProt: P9WJL3 (all domains)
Gene: murE

Molecule: UDP-N-ACETYLMURAMOYL-L-ALANYL-D-GLUTAMATE--2,6-DIAMINOPIMELATE LIGASE

3D Structure

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Related Domains

Browse other domains in Mur_ligase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupMurF and HprK N-domain-like(2493)

HH-groupMurF and HprK N-domain-like(2493.1)

TT-groupMurF and HprK N-domain-like(2493.1.1)

FFamilyMur_ligase(2493.1.1.1)

Ligands

in contact, ≤ 4 Å

Uridine-5'-Diphosphate-N-Acetylmuramoyl-L-Alanine-D-GlutamateUAG
drugDrugBank DB02314

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01225Mur_ligase

Mur ligase family, catalytic domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 2XJA RCSB PDB: 2XJA PDBe: 2XJA UniProt: P9WJL3

Downloads

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