ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2ozrC1 - ECOD Domain | ECOD

ECOD/Domains/e2ozrC1

e2ozrC1

UID: 000118565

PDB

Range: C:89-246
PDB: 2OZR chain C(all domains)
UniProt: P45452 (all domains)
Gene: MMP13

Molecule: Collagenase 3

3D Structure

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Related Domains

Browse other domains in Peptidase_M10 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupZincin-like(2498)

HH-groupMetalloproteases ("zincins") catalytic domain(2498.1)

TT-groupMetalloproteases ("zincins") catalytic domain(2498.1.1)

FFamilyPeptidase_M10(2498.1.1.1)

Ligands

in contact, ≤ 4 Å

4-{[1-METHYL-2,4-DIOXO-6-(3-PHENYLPROP-1-YN-1-YL)-1,4-DIHYDROQUINAZOLIN-3(2H)-YL]METHYL}BENZOIC ACIDGG1
drugDrugBank DB07827
Acetohydroxamic acidHAE
drugDrugBank DB00551

Pfam Families

PF00413Peptidase_M10

Matrixin

ClanCL0126Peptidase_MA

External Links

ECOD PDB View: 2OZR RCSB PDB: 2OZR PDBe: 2OZR UniProt: P45452

Downloads

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Calcium ionCA

metal

Zinc ionZN

metal

Shown in the structure viewer. Drug annotations from DrugDomain.