ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2jlaD8 - ECOD Domain | ECOD

ECOD/Domains/e2jlaD8

e2jlaD8

UID: 001185726

PDB

Range: D:358-556
PDB: 2JLA chain D(all domains)
UniProt: P17109 (all domains)
Gene: menD

Molecule: 2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE -1-CARBOXYLATE SYNTHASE

3D Structure

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Related Domains

Browse other domains in TPP_enzyme_C →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupThiamin diphosphate-binding fold (THDP-binding)(7574)

HH-groupThiamin diphosphate-binding fold (THDP-binding)(7574.1)

TT-groupThiamin diphosphate-binding fold (THDP-binding)(7574.1.1)

FFamilyTPP_enzyme_C(7574.1.1.5)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
MANGANESE (II) IONMN
metal
Thiamine diphosphateTPP

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02775TPP_enzyme_C

Thiamine pyrophosphate enzyme, C-terminal TPP binding domain

ClanCL0254THDP-binding

External Links

ECOD PDB View: 2JLA RCSB PDB: 2JLA PDBe: 2JLA UniProt: P17109

Downloads

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