ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3zhuB8 - ECOD Domain | ECOD

ECOD/Domains/e3zhuB8

e3zhuB8

UID: 001185769

PDB

Range: B:820-1090
PDB: 3ZHU chain B(all domains)
UniProt: A0R2B1 (all domains)
Gene: kgd

Molecule: MULTIFUNCTIONAL 2-OXOGLUTARATE METABOLISM ENZYME

3D Structure

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Related Domains

Browse other domains in Transket_pyr →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupThiamin diphosphate-binding fold (THDP-binding)(7574)

HH-groupThiamin diphosphate-binding fold (THDP-binding)(7574.1)

TT-groupThiamin diphosphate-binding fold (THDP-binding)(7574.1.1)

FFamilyTransket_pyr(7574.1.1.8)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
(5R)-5-{3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-4-methyl-5-(2-{[(phosphonatooxy)phosphinato]oxy}ethyl)-1,3-thiazol-3-ium-2-yl}-5-hydroxypentanoateTD8

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02779Transket_pyr

Transketolase, pyrimidine binding domain

ClanCL0254THDP-binding

External Links

ECOD PDB View: 3ZHU RCSB PDB: 3ZHU PDBe: 3ZHU UniProt: A0R2B1

Downloads

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