ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4kgdA6 - ECOD Domain | ECOD

ECOD/Domains/e4kgdA6

e4kgdA6

UID: 001185899

PDB

Range: A:183-365
PDB: 4KGD chain A(all domains)
UniProt: C6VNC6 (all domains)

Molecule: Pyruvate oxidase

3D Structure

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Related Domains

Browse other domains in TPP_enzyme_M →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupDHS-like NAD/FAD-binding domain(2003.1.4)

FFamilyTPP_enzyme_M(2003.1.4.1)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer.

Pfam Families

PF00205TPP_enzyme_M

Thiamine pyrophosphate enzyme, central domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 4KGD RCSB PDB: 4KGD PDBe: 4KGD UniProt: C6VNC6

Downloads

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Drug annotations from DrugDomain.