ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4bvpA5 - ECOD Domain | ECOD

ECOD/Domains/e4bvpA5

e4bvpA5

UID: 001187175

PDB

Range: A:175-393
PDB: 4BVP chain A(all domains)
UniProt: Q5ZUA2 (all domains)
Gene: lpg1905

Molecule: ECTONUCLEOSIDE TRIPHOSPHATE DIPHOSPHOHYDROLASE I

3D Structure

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Related Domains

Browse other domains in GDA1_CD39 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyGDA1_CD39(2484.1.1.15)

Ligands

in contact, ≤ 4 Å

HeptamolybdateMO7
drugDrugBank DB04414
MolybdateMOO
drugDrugBank DB15878

Pfam Families

PF01150GDA1_CD39

GDA1/CD39 (nucleoside phosphatase) family

ClanCL0108Actin_ATPase

External Links

ECOD PDB View: 4BVP RCSB PDB: 4BVP PDBe: 4BVP UniProt: Q5ZUA2

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

TETRAKIS-(MU-OXO)-DECA-OXO-TRIMOLYBDENUM

bis(mu4-oxo)-tetrakis(mu3-oxo)-hexakis(mu2-oxo)-hexadecaoxo-octamolybdenum (VI)8M0

Chloride ionCL

bis(mu2-oxo)-octaoxo-dimolybdenum (VI)M27

Magnesium ionMG

metal

Sodium ionNA

metal

+ 3 additives (Glycerin, 2-(N-morpholino)ethanesulfonic acid, 1,2-ETHANEDIOL)

GlycerinGOL
DrugBank DB09462
2-(N-morpholino)ethanesulfonic acidMES
DrugBank DB03814
1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.