ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e4be2A7 - ECOD Domain | ECOD

ECOD/Domains/e4be2A7

e4be2A7

UID: 001187402

PDB

Range: A:8-108
PDB: 4BE2 chain A(all domains)
UniProt: P14350 (all domains)
Gene: pol

Molecule: PFV INTEGRASE

3D Structure

Loading viewer...

Related Domains

Browse other domains in Integrase_H2C2 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupThree-helical HTH(101.1.1)

FFamilyIntegrase_H2C2(101.1.1.76)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

+ 1 additive (Glycerol)

GlycerolGOL

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF17921Integrase_H2C2

Integrase zinc binding domain

ClanCL0361C2H2-zf

External Links

ECOD PDB View: 4BE2 RCSB PDB: 4BE2 PDBe: 4BE2 UniProt: P14350

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure