ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2x6sE3 - ECOD Domain | ECOD

ECOD/Domains/e2x6sE3

e2x6sE3

UID: 001187504

PDB

Range: E:117-302
PDB: 2X6S chain E(all domains)
UniProt: P14350 (all domains)
Gene: pol

Molecule: INTEGRASE

3D Structure

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Related Domains

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Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyrve(2484.1.1.9)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Integrase core domain

ClanCL0219RNase_H

External Links

ECOD PDB View: 2X6S RCSB PDB: 2X6S PDBe: 2X6S UniProt: P14350

Downloads

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