ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1h8gB2 - ECOD Domain | ECOD

ECOD/Domains/e1h8gB2

e1h8gB2

UID: 001189363

PDB

Range: B:225-318
PDB: 1H8G chain B(all domains)
UniProt: P06653 (all domains)
Gene: lytA

Molecule: MAJOR AUTOLYSIN

3D Structure

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Related Domains

Browse other domains in Putative cell wall binding repeat / Choline-binding repeat →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-hairpin stack(702)

HH-groupbeta-hairpin stack(702.1)

TT-groupbeta-hairpin stack(702.1.1)

FFamilyPutative cell wall binding repeat / Choline-binding repeat(702.1.1.4)

Ligands

in contact, ≤ 4 Å

CholineCHT
drugDrugBank DB00122

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01473Choline_bind_1

Putative cell wall binding repeat

ClanCL0694Choline_binding

PF19127Choline_bind_3

Choline-binding repeat

ClanCL0694Choline_binding

External Links

ECOD PDB View: 1H8G RCSB PDB: 1H8G PDBe: 1H8G UniProt: P06653

Downloads

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