ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3wjrA6 - ECOD Domain | ECOD

ECOD/Domains/e3wjrA6

e3wjrA6

UID: 001189494

PDB

Range: A:43-155
PDB: 3WJR chain A(all domains)
UniProt: Q5JII7 (all domains)
Gene: TK1993

Molecule: Hydrogenase expression/formation protein HypE

3D Structure

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Related Domains

Browse other domains in AIRS →

Classification

AArchitecturea+b three layers(a.12)

XX-groupBacillus chorismate mutase-like(301)

HH-groupPurM N-terminal domain-like(301.2)

TT-groupPurM N-terminal domain-like(301.2.1)

FFamilyAIRS(301.2.1.1)

Ligands

in contact, ≤ 4 Å

Adenosine phosphateAMP
drugDrugBank DB00131within 5 Å only
BenzamidineBEN
Magnesium ionMG

Pfam Families

AIR synthase related protein, N-terminal domain

ClanCL0804PurM_N-like

External Links

ECOD PDB View: 3WJR RCSB PDB: 3WJR PDBe: 3WJR UniProt: Q5JII7

Downloads

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metal

+ 2 additives (Triethylene glycol, Sulfate ion)

Triethylene glycolPGE
DrugBank DB02327
Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.