ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3vm6B3 - ECOD Domain | ECOD

ECOD/Domains/e3vm6B3

e3vm6B3

UID: 001189921

PDB

Range: B:2-110
PDB: 3VM6 chain B(all domains)
UniProt: Q5JFM9 (all domains)
Gene: TK0185

Molecule: Translation initiation factor eIF-2B, delta subunit

3D Structure

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Related Domains

Browse other domains in IF-2B →

Classification

AArchitecturealpha bundles(a.7)

XX-groupTranslation initiation factor eIF-2B delta subunit N-terminal helical domain(3651)

HH-groupTranslation initiation factor eIF-2B delta subunit N-terminal helical domain(3651.1)

TT-groupTranslation initiation factor eIF-2B delta subunit N-terminal helical domain(3651.1.1)

FFamilyIF-2B(3651.1.1.1)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
1,5-di-O-phosphono-alpha-D-ribofuranoseRI2

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Initiation factor 2 subunit family

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 3VM6 RCSB PDB: 3VM6 PDBe: 3VM6 UniProt: Q5JFM9

Downloads

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