ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2kgoA1 - ECOD Domain | ECOD

ECOD/Domains/e2kgoA1

e2kgoA1

UID: 000119208

RepresentativePDB

Range: A:21-108
PDB: 2KGO chain A(all domains)
UniProt: P41039 (all domains)
Gene: ybiI

Molecule: Uncharacterized protein ybiI

3D Structure

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Related Domains

Browse other domains in zf-dskA_traR →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupGlucocorticoid receptor-like(377)

HH-groupLIM domain-like(377.1)

TT-groupLIM domain-like(377.1.1)

FFamilyzf-dskA_traR(377.1.1.7)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01258zf-dskA_traR

Prokaryotic dksA/traR C4-type zinc finger

ClanCL0839Tbcl_zf

External Links

ECOD PDB View: 2KGO RCSB PDB: 2KGO PDBe: 2KGO UniProt: P41039

Downloads

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