ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3a1bA2 - ECOD Domain | ECOD

ECOD/Domains/e3a1bA2

e3a1bA2

UID: 000119312

RepresentativePDB

Range: A:531-610
PDB: 3A1B chain A(all domains)
UniProt: Q9Y6K1 (all domains)
Gene: DNMT3A

Molecule: DNA (cytosine-5)-methyltransferase 3A, Histone H3.1

3D Structure

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Related Domains

Browse other domains in DNMT3_ADD_GATA1-like →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRING/U-box-like(376)

HH-groupRING/U-box-like(376.1)

TT-groupFYVE/PHD zinc finger(376.1.3)

FFamilyDNMT3_ADD_GATA1-like(376.1.3.19)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF21255DNMT3_ADD_GATA1-like

DNMT3, ADD PHD zinc finger

ClanCL0229RING

External Links

ECOD PDB View: 3A1B RCSB PDB: 3A1B PDBe: 3A1B UniProt: Q9Y6K1

Downloads

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