ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4iy7A3 - ECOD Domain | ECOD

ECOD/Domains/e4iy7A3

e4iy7A3

UID: 001193276

PDB

Range: A:14-261
PDB: 4IY7 chain A(all domains)
UniProt: Q5H4T8 (all domains)
Gene: metB

Molecule: Cystathionine gamma-lyase-like protein

3D Structure

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Related Domains

Browse other domains in Cys_Met_Meta_PP →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPLP-dependent transferases(7577)

HH-groupPLP-dependent transferases(7577.1)

TT-groupPLP-dependent transferases(7577.1.1)

FFamilyCys_Met_Meta_PP(7577.1.1.7)

Ligands

in contact, ≤ 4 Å

Pyruvic acidPYR
drugDrugBank DB00119
SerineSER
drugDrugBank DB00133
2-{[(E)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene]amino}prop-2-enoic acid

Pfam Families

PF01053Cys_Met_Meta_PP

Cys/Met metabolism PLP-dependent enzyme

ClanCL0061PLP_aminotran

External Links

ECOD PDB View: 4IY7 RCSB PDB: 4IY7 PDBe: 4IY7 UniProt: Q5H4T8

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

(E)-N-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene)-L-serineKOU

+ 2 additives (Sulfate ion, Glycerol)

Sulfate ionSO4
DrugBank DB14546
GlycerolGOL

Shown in the structure viewer. Drug annotations from DrugDomain.