ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3vk2D3 - ECOD Domain | ECOD

ECOD/Domains/e3vk2D3

e3vk2D3

UID: 001193298

PDB

Range: D:6-262
PDB: 3VK2 chain D(all domains)
UniProt: P13254 (all domains)
Gene: mdeA

Molecule: Methionine gamma-lyase

3D Structure

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Related Domains

Browse other domains in Cys_Met_Meta_PP →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPLP-dependent transferases(7577)

HH-groupPLP-dependent transferases(7577.1)

TT-groupPLP-dependent transferases(7577.1.1)

FFamilyCys_Met_Meta_PP(7577.1.1.7)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01053Cys_Met_Meta_PP

Cys/Met metabolism PLP-dependent enzyme

ClanCL0061PLP_aminotran

External Links

ECOD PDB View: 3VK2 RCSB PDB: 3VK2 PDBe: 3VK2 UniProt: P13254

Downloads

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