ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2ogaC2 - ECOD Domain | ECOD

ECOD/Domains/e2ogaC2

e2ogaC2

UID: 001193344

PDB

Range: C:8-242
PDB: 2OGA chain C(all domains)
UniProt: Q9ZGH4 (all domains)
Gene: desV

Molecule: Transaminase

3D Structure

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Related Domains

Browse other domains in DegT_DnrJ_EryC1 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPLP-dependent transferases(7577)

HH-groupPLP-dependent transferases(7577.1)

TT-groupPLP-dependent transferases(7577.1.1)

FFamilyDegT_DnrJ_EryC1(7577.1.1.6)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
Sodium ionNA
metal
N-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methyl)-L-glutamic acidPGU

+ 1 additive (1,2-ETHANEDIOL)

Pfam Families

PF01041DegT_DnrJ_EryC1

DegT/DnrJ/EryC1/StrS aminotransferase family

ClanCL0061PLP_aminotran

External Links

ECOD PDB View: 2OGA RCSB PDB: 2OGA PDBe: 2OGA UniProt: Q9ZGH4

Downloads

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1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.