ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3hl2B3 - ECOD Domain | ECOD

ECOD/Domains/e3hl2B3

e3hl2B3

UID: 001193567

PDB

Range: B:326-463
PDB: 3HL2 chain B(all domains)
UniProt: Q9HD40 (all domains)
Gene: SEPSECS

Molecule: O-phosphoseryl-tRNA(Sec) selenium transferase

3D Structure

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Related Domains

Browse other domains in SepSecS →

Classification

AArchitecturea+b two layers(a.11)

XX-groupC-terminal domain in some PLP-dependent transferases(3016)

HH-groupC-terminal domain in some PLP-dependent transferases(3016.1)

TT-groupC-terminal domain in some PLP-dependent transferases(3016.1.1)

FFamilySepSecS(3016.1.1.13)

Ligands

in contact, ≤ 4 Å

DexfosfoserineSEP
drugDrugBank DB04522

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF05889SepSecS

O-phosphoseryl-tRNA(Sec) selenium transferase, SepSecS

ClanCL0061PLP_aminotran

External Links

ECOD PDB View: 3HL2 RCSB PDB: 3HL2 PDBe: 3HL2 UniProt: Q9HD40

Downloads

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