ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3b1dC2 - ECOD Domain | ECOD

ECOD/Domains/e3b1dC2

e3b1dC2

UID: 001193902

PDB

Range: C:3-284
PDB: 3B1D chain C(all domains)
UniProt: A6BMJ3 (all domains)
Gene: lcd

Molecule: BetaC-S lyase

3D Structure

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Related Domains

Browse other domains in Aminotran_1_2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPLP-dependent transferases(7577)

HH-groupPLP-dependent transferases(7577.1)

TT-groupPLP-dependent transferases(7577.1.1)

FFamilyAminotran_1_2(7577.1.1.1)

Ligands

in contact, ≤ 4 Å

Pyridoxal phosphatePLP
drugDrugBank DB00114
[3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL]-SERINEPLS

+ 1 additive (HEPES)

HEPES

Pfam Families

PF00155Aminotran_1_2

Aminotransferase class I and II

ClanCL0061PLP_aminotran

External Links

ECOD PDB View: 3B1D RCSB PDB: 3B1D PDBe: 3B1D UniProt: A6BMJ3

Downloads

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DrugBank DB16872

Shown in the structure viewer. Drug annotations from DrugDomain.