ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2vlhA2 - ECOD Domain | ECOD

ECOD/Domains/e2vlhA2

e2vlhA2

UID: 001194016

PDB

Range: A:1-311
PDB: 2VLH chain A(all domains)
UniProt: P31013 (all domains)
Gene: tpl

Molecule: TYROSINE PHENOL-LYASE

3D Structure

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Related Domains

Browse other domains in Beta_elim_lyase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPLP-dependent transferases(7577)

HH-groupPLP-dependent transferases(7577.1)

TT-groupPLP-dependent transferases(7577.1.1)

FFamilyBeta_elim_lyase(7577.1.1.8)

Ligands

in contact, ≤ 4 Å

Pyridoxal phosphatePLP
drugDrugBank DB00114within 5 Å only
Potassium ionK
metal
(2E)-2-{[(Z)-{3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4(1H)-YLIDENE}METHYL]IMINO}-4-(METHYLSULFANYL)BUTANOIC ACID

Pfam Families

PF01212Beta_elim_lyase

Beta-eliminating lyase

ClanCL0061PLP_aminotran

External Links

ECOD PDB View: 2VLH RCSB PDB: 2VLH PDBe: 2VLH UniProt: P31013

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 2 additives (Heptaethylene glycol, Triethylene glycol)

Heptaethylene glycolP33
DrugBank DB03394
Triethylene glycolPGE
DrugBank DB02327

Shown in the structure viewer. Drug annotations from DrugDomain.