ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3pj0D2 - ECOD Domain | ECOD

ECOD/Domains/e3pj0D2

e3pj0D2

UID: 001194022

PDB

Range: D:23-252
PDB: 3PJ0 chain D(all domains)
UniProt: Q8YA56 (all domains)
Gene: lmo0305

Molecule: Lmo0305 protein

3D Structure

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Related Domains

Browse other domains in Beta_elim_lyase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPLP-dependent transferases(7577)

HH-groupPLP-dependent transferases(7577.1)

TT-groupPLP-dependent transferases(7577.1.1)

FFamilyBeta_elim_lyase(7577.1.1.8)

Ligands

in contact, ≤ 4 Å

(4R)-2-METHYLPENTANE-2,4-DIOLMRD

+ 1 additive ((4r)-2-Methylpentane-2,4-Diol)

(4r)-2-Methylpentane-2,4-DiolMPD
DrugBank DB03564

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01212Beta_elim_lyase

Beta-eliminating lyase

ClanCL0061PLP_aminotran

External Links

ECOD PDB View: 3PJ0 RCSB PDB: 3PJ0 PDBe: 3PJ0 UniProt: Q8YA56

Downloads

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