ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1ejiC2 - ECOD Domain | ECOD

ECOD/Domains/e1ejiC2

e1ejiC2

UID: 001194108

PDB

Range: C:322-484
PDB: 1EJI chain C(all domains)
UniProt: P50431 (all domains)
Gene: Shmt1

Molecule: SERINE HYDROXYMETHYLTRANSFERASE

3D Structure

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Related Domains

Browse other domains in SHMT →

Classification

AArchitecturea+b two layers(a.11)

XX-groupC-terminal domain in some PLP-dependent transferases(3016)

HH-groupC-terminal domain in some PLP-dependent transferases(3016.1)

TT-groupC-terminal domain in some PLP-dependent transferases(3016.1.1)

FFamilySHMT(3016.1.1.5)

Ligands

in contact, ≤ 4 Å

N-Pyridoxyl-Glycine-5-MonophosphatePLG
drugDrugBank DB02824

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Serine hydroxymethyltransferase

ClanCL0061PLP_aminotran

External Links

ECOD PDB View: 1EJI RCSB PDB: 1EJI PDBe: 1EJI UniProt: P50431

Downloads

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