ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3p1gA1 - ECOD Domain | ECOD

ECOD/Domains/e3p1gA1

e3p1gA1

UID: 000119512

RepresentativePDB

Range: A:500-667
PDB: 3P1G chain A(all domains)
UniProt: A1Z651 (all domains)
Gene: gag-pol

Molecule: Xenotropic Murine Leukemia Virus-Related Virus (XMRV) RNase H Domain

3D Structure

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Related Domains

Browse other domains in RNase_H →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyRNase_H(2484.1.1.4)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00075RNase_H

RNase H

ClanCL0219RNase_H

External Links

ECOD PDB View: 3P1G RCSB PDB: 3P1G PDBe: 3P1G UniProt: A1Z651

Downloads

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