ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3trpA5 - ECOD Domain | ECOD

ECOD/Domains/e3trpA5

e3trpA5

UID: 001196466

PDB

Range: A:229-353
PDB: 3TRP chain A(all domains)
UniProt: P07221 (all domains)
Gene: CASQ1

Molecule: Calsequestrin-1

3D Structure

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Related Domains

Browse other domains in Calsequestrin →

Classification

AArchitecturea+b three layers(a.12)

XX-groupThioredoxin-like(2485)

HH-groupThioredoxin-like(2485.1)

TT-groupThioredoxin-like(2485.1.1)

FFamilyCalsequestrin(2485.1.1.8)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
(4R)-2-METHYLPENTANE-2,4-DIOLMRD
Sodium ionNA
metal

Pfam Families

PF01216Calsequestrin

Calsequestrin

ClanCL0172Thioredoxin

External Links

ECOD PDB View: 3TRP RCSB PDB: 3TRP PDBe: 3TRP UniProt: P07221

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 1 additive ((4r)-2-Methylpentane-2,4-Diol)

(4r)-2-Methylpentane-2,4-DiolMPD
DrugBank DB03564

Shown in the structure viewer. Drug annotations from DrugDomain.