ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3pndC4 - ECOD Domain | ECOD

ECOD/Domains/e3pndC4

e3pndC4

UID: 001201977

PDB

Range: C:224-348
PDB: 3PND chain C(all domains)
UniProt: P41780 (all domains)
Gene: apbE

Molecule: Thiamine biosynthesis lipoprotein ApbE

3D Structure

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Related Domains

Browse other domains in ApbE →

Classification

AArchitecturea+b two layers(a.11)

XX-groupT-fold(230)

HH-groupApbE-like(230.4)

TT-groupApbE-like(230.4.1)

FFamilyApbE(230.4.1.1)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer.

Pfam Families

ApbE family

ClanCL0989ApbE

External Links

ECOD PDB View: 3PND RCSB PDB: 3PND PDBe: 3PND UniProt: P41780

Downloads

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Drug annotations from DrugDomain.