ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4g3mC4 - ECOD Domain | ECOD

ECOD/Domains/e4g3mC4

e4g3mC4

UID: 001202153

PDB

Range: C:1-143
PDB: 4G3M chain C(all domains)
UniProt: P17618 (all domains)
Gene: ribD

Molecule: Riboflavin biosynthesis protein RibD

3D Structure

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Related Domains

Browse other domains in dCMP_cyt_deam_1 →

Classification

AArchitecturea+b three layers(a.12)

XX-groupCytidine deaminase-like(2492)

HH-groupCytidine deaminase-like(2492.1)

TT-groupCytidine deaminase-like(2492.1.1)

FFamilydCMP_cyt_deam_1(2492.1.1.1)

Ligands

in contact, ≤ 4 Å

N-(5-amino-2,6-dioxo-1,2,3,6-tetrahydropyrimidin-4-yl)-5-O-phosphono-beta-D-ribofuranosylamineAOF
Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00383dCMP_cyt_deam_1

Cytidine and deoxycytidylate deaminase zinc-binding region

ClanCL0109CDA

External Links

ECOD PDB View: 4G3M RCSB PDB: 4G3M PDBe: 4G3M UniProt: P17618

Downloads

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